feat[latex,bash] Updated latex templates

I updated the latex templates and process.
I updated the mechanism for accessing bash and other shells.

config.org

@@ -36,12 +36,16 @@ Some basic settings for Emacs
 Set the theme.
 /Use something dark/
 +I also prefer relative line numbers because of *evil* mode+
-Relative line numbers don't work, because of foling in Org-mode.
+Relative line numbers don't seem to work, because of folding in Org-mode.
 #+begin_src emacs-lisp
 (setq doom-theme 'doom-homage-black)
+(condition-case nil
     (setq doom-font (font-spec :family "Hack Nerd Font Mono" :size 16 :weight 'medium))
+  (error (set-face-attribute 'default nil :height 130)))
+
 (setq auto-save-default nil) ;I don't like autosaving. Let me do it myself.
 #+end_src
+
 ** Doom splash screen
 I really don't like the widgets, and I think it takes longer to load so I get rid of them
 #+begin_src emacs-lisp
@@ -60,6 +64,8 @@ I want a non-ESC way to get back to normal mode:
 (after! org-mode (map! :desc "Delete previous character in insert mode" :i "C-h" #'evil-delete-backward-char))
 (map! :desc "Increment number below or after cursor" :n "C-a" #'evil-numbers/inc-at-pt)
 (map! :desc "Decrement number below or after cursor" :n "C-x" #'evil-numbers/dec-at-pt)
+(map! :n "g j" #'evil-next-visual-line)
+(map! :n "g k" #'evil-previous-visual-line)
 #+end_src
 
 * Terminal setup
@@ -69,13 +75,48 @@ I like to just use bash:
   "Lauch term with /bin/bash"
   (interactive)
   (term "/bin/bash"))
-(map!
-      :desc "Start a bash shell"
-      "<f6>" #'bash)
+
+(defun dash nil
+  "Lauch term with /bin/dash"
+  (interactive)
+  (term "/bin/dash"))
+
+(defun zsh nil
+  "Lauch term with /bin/zsh"
+  (interactive)
+  (term "/bin/zsh"))
+
 #+end_src
 
-I don't like the modeline in the terminal.
+#+RESULTS:
+: zsh
+
+** Shell mappings
 #+begin_src emacs-lisp
+(map! :leader (:prefix ("k" . "shell")
+
+      :desc "Start a bash shell"
+      :n "b" #'bash
+
+      :desc "Start a dash shell"
+      :n "d" #'dash
+
+      :desc "Start a zsh shell"
+      :n "z" #'zsh
+
+      :desc "Start an elisp repl"
+      :n "e" #'+emacs-lisp/open-repl
+
+      :desc "Start a python repl"
+      :n "j" #'+python/open-repl))
+#+end_src
+
+#+RESULTS:
+
+,#+RESULTS:
+
+I don't like the modeline in the terminal.
+,#+begin_src emacs-lisp
 (add-hook 'term-mode-hook 'hide-mode-line-mode)
 #+end_src
 * Sage-math
@@ -122,6 +163,14 @@ Because I sometimes use Fish or another shell, it's good to make sure bash is ru
       :desc "Insert the current date into the buffer"
       "i d" #'insert-current-date)
 #+end_src
+** Convert regex strings to rx
+#+begin_src elisp :tangle packages.el
+(package! xr)
+#+end_src
+
+#+begin_src elisp
+(use-package! xr)
+#+end_src
 * Creating Diagrams and graphs
 ** TODO set default values using org-babel's features for that.
 
@@ -149,8 +198,6 @@ Because I sometimes use Fish or another shell, it's good to make sure bash is ru
 :END:
 This preprocessor script allows me to use Ripgrep with Age to filter agenda files.
 You can see the configuration for that in [[#agenda-efficient][this section]].
-
-
 #+begin_src zsh :tangle "/home/user/age-preprocessor.zsh"
 #!/usr/bin/env zsh
 
@@ -191,7 +238,6 @@ Emacs has better default values now, so it will ask to evaluate local variables.
 * Org-mode for a great todo list
 ** Making the Agenda features more efficient
 Using ripgrep we can automatically narrow org-agenda files.
-
 *** Finding Files with Ripgrep
 :PROPERTIES:
 :CUSTOM_ID: agenda-efficient
@@ -218,6 +264,16 @@ And then we want to call this before building the agenda:
 #+begin_src emacs-lisp
 (add-hook 'org-agenda-mode-hook 'set-org-agenda-files-ripgrep)
 #+end_src
+*** Filtering the agenda
+I don't want the agenda to show more than one day be default.
+#+begin_src emacs-lisp
+(after! org
+(setq org-agenda-start-day "-8d")
+(setq org-agenda-span 9))
+#+end_src
+
+#+RESULTS:
+: 9
 
 
 ** Basic settings
@@ -278,17 +334,20 @@ Edna allows better dependency handling for todos and the like.
 (org-habit-graph-column 1)
 (org-habit-preceding-days 10)
 (org-habit-following-days 1)
-(org-habit-show-habits-only-for-today nil))
+(org-habit-show-habits-only-for-today t))
 
 #+end_src
 
 
 ** Anki editing in org-mode
+Anki editor is a good one for large cards that need high complexity.
 #+begin_src emacs-lisp :tangle packages.el
 (package! anki-editor)
 #+end_src
 
-*** Configuring inline-anki
+*** inline-anki
+Inline anki is far better for small cards, and where it is best to maintain a /single source of truth/.
+
 #+begin_src emacs-lisp :tangle packages.el
 (package! asyncloop)
 (package! inline-aki
@@ -299,6 +358,18 @@ Edna allows better dependency handling for todos and the like.
 (setq inline-anki-note-type "Katex and Markdown Cloze")
 (setq inline-anki-use-tags t)
 #+end_src
+
+**** Inline Anki symbol
+By default, [[*inline-anki][Inline-anki]] uses _underscore_ to specify the card type.
+This is okay, but I'd rather find something that isn't already used.
+#+begin_src emacs-lisp
+(add-to-list 'org-emphasis-alist '("." nil))
+(setq inline-anki-emphasis-type "_")
+#+end_src
+
+#+RESULTS:
+: _
+
 ** calfw Calendar View
 #+begin_src emacs-lisp :tangle "packages.el"
 (package! calfw
@@ -328,15 +399,6 @@ In order for editorconfig to do its thing, indentation by the lsp must be disabl
 #+end_src
 
 
-#+begin_src emacs-lisp
-(add-to-list 'org-roam-capture-templates
-    '("m" "Markdown" plain "" :target
-        (file+head "training-resources/content/${title}.md"
-"---\ntitle: ${title}\nid: %<%Y-%m-%dT%H%M%S>\ncategory: \n---\n")
-    :unnarrowed t))
-#+end_src
-
-
 ** Hugo base directory
 #+begin_src emacs-lisp
 (setq org-hugo-base-dir (concat org-directory (file-name-as-directory "website")))
@@ -378,10 +440,7 @@ I've found that lualatex does a good job processing PDFs. $hi$
 #+begin_src emacs-lisp
 (after! ox-latex
   (setq org-latex-pdf-process
-  '("lualatex --output-directory=/home/user/Documents -shell-escape -interaction nonstopmode %f"
-    "lualatex --output-directory=/home/user/Documents -shell-escape -interaction nonstopmode %f"))
-  )
-
+  '("lualatex --output-directory=/home/user/Documents -shell-escape -interaction nonstopmode %f")))
 #+end_src
 
 $x + 1 = 3$
@@ -526,8 +585,35 @@ We'll want a handy shortcut for this.
 #+end_src
 #+RESULTS:
 : /home/user/.config/doom/
+*** Delete links from inline anki
+#+begin_src elisp
+(defun inline-anki-link-filter (link backend info)
+  "Rewrite links in export to preserve link text only"
+  (if (eq backend 'inline-anki--ox-anki-html-backend)
+      (save-match-data ; is usually a good idea
+        (and (string-match "\\[(?:\\[([^\\]\\[]*)\\])(?:\\[(.*)\\])?\\]" link)
+             (match-string 2 link)))))
+#+end_src
+
+#+RESULTS:
+: inline-anki-link-filter
+
+#+begin_src elisp
+(add-to-list 'org-export-filter-link-functions
+              'inline-anki-link-filter)
+#+end_src
+
+
+#+begin_src elisp
+
+#+end_src
+#+RESULTS:
+| inline-anki-link-filter |
 
 ** Automatic Citations with *citar* and *org-cite*
+:PROPERTIES:
+:custom_id: citation-settings
+:END:
 Citar is a sweet little package for managing citations.
 We want a general [[file:~/org/references.bib][bibliography file]], a [[file:~/Zotero/styles/][styles directory]],
 and a default set of styles.
@@ -666,6 +752,9 @@ Org-roam enables features essential to a Zettelkasten such as inter-ID linking.
       :init (setq org-roam-directory "~/org/"))      :custom
 #+end_src
 
+I use several capture templates to make it easy to get notes into my various sections.
+I only use [[#md-roam-config][Markdown]] in the team wiki, so I have it set to that.
+I also have a capture template form my [[Website]]
 #+begin_src emacs-lisp
 (after! org-roam
   :ensure t
@@ -674,30 +763,30 @@ Org-roam enables features essential to a Zettelkasten such as inter-ID linking.
         `(
           ("d" "default" plain "%?"
            :target (file+head "%<%Y%m%d-%H%M%S>.org"
-                             "#+TITLE: ${title}\n#+HTML_HEAD: <link rel=\"stylesheet\" type=\"text/css\" href=\"css/retro.css\" />\n")
-          :unnarrowed t)
-
-        ("s" "school" plain "%?"
-          :target (file+head "%<%Y%m%d-%H%M%S>.org"
-"#+TITLE: ${title}
-,#+LATEX_CLASS: student-apa7
-,#+LATEX_OPTIONS: stu
-,#+LATEX_HEADER: \\course{}
-,#+LATEX_HEADER:\\authorsnames{Judah Sotomayor}
-,#+LATEX_HEADER: \\authorsaffiliations{}
-,#+LATEX_HEADER: \\professor{}
-,#+LATEX_HEADER: \\usepackage{times}
-,#+LATEX_HEADER: \\duedate{}
-,#+OPTIONS: toc:nil\n")
+                              "#+TITLE: ${title}\n")
            :unnarrowed t)
 
           ("c" "encrypted" plain "%?"
            :target (file+head "%<%Y%m%d-%H%M%S>.sec.org.age"
-                             "#+TITLE: ${title}\n#+FILETAGS: :secure:noexport:\n#+HTML_HEAD: <link rel=\"stylesheet\" type=\"text/css\" href=\"css/retro.css\" />\n\n\n* No Export Below This Line")
-          :unnarrowed t))))
+                              "#+TITLE: ${title}\n#+FILETAGS: :secure:noexport:\n\n* No Export Below This Line")
+           :unnarrowed t)
 
+          ("m" "Markdown" plain ""
+           :target
+           (file+head "training-resources/content/${title}.md"
+                      "---\ntitle: ${title}\nid: %<%Y-%m-%dT%H%M%S>\ncategory: \n---\n")
+           :unnarrowed t)
+
+          ("w" "Website" plain "%?"
+           :target
+           (file+head "website/src/posts/%<%Y%m%d-%H%M%S>.org"
+                      "#+TITLE: ${title}\n#+DRAFT: true\n")
+           :unnarrowed t))))
 #+end_src
 
+#+RESULTS:
+| d | default | plain | %? | :target | (file+head %<%Y%m%d-%H%M%S>.org #+TITLE: ${title} |
+
 *** Keybinds
 Org-roam has many commands, of which I have bound the most important below.
 This entails creating a local leader.
@@ -768,7 +857,7 @@ I use =r= for this purpose. It is close and goes well with *roam*.
 
                 ))))
 #+END_SRC
-**** Function to pull up org-roam ui
+**** COMMENT Function to pull up org-roam ui
 #+begin_src emacs-lisp
 (defun open-org-roam-ui ()
   (interactive)
@@ -833,12 +922,28 @@ Adding up values for one key is supported."
 *** ox-extra for ":ignore:" tags
 I want to be able to ignore headings on export.
 #+begin_src emacs-lisp
-(after! org
   (use-package! ox-extra
+    :after (org)
     :config
-    (ox-extras-activate '(latex-header-blocks ignore-headlines))))
+    (ox-extras-activate '(latex-header-blocks ignore-headlines)))
 #+end_src
-*** Resume template
+*** McDowell Resume Template
+This template is supposed to be the standard.
+#+begin_src emacs-lisp
+(add-to-list 'org-latex-classes
+             '("mcdowellcv"
+               "\\documentclass[]{mcdowellcv}
+                \\usepackage{amsmath}
+                \\usepackage[]{multicol}
+                \\usepackage[hidelinks]{hyperref}
+    [NO-DEFAULT-PACKAGES]
+    [NO-PACKAGES]"
+               ("\\begin{cvsection}{%s}" "\\end{cvsection}")
+               ("\\begin{cvsubsection}{%s}" "\\end{cvsubsection}")))
+
+#+end_src
+*** Altacv template :ARCHIVE:
+This is no longer really used.
 #+begin_src emacs-lisp
 (add-to-list 'org-latex-classes
              '("altacv" "\\documentclass[10pt,a4paper,ragged2e,withhyper]{altacv}
@@ -884,33 +989,6 @@ I want to be able to ignore headings on export.
                ("\\cvsection{%s}" . "\\cvsection*{%s}")
                ("\\cvevent{%s}" . "\\cvevent*{%s}")))
 #+end_src
-*** McDowell Resume Template
-This template is supposed to be the standard.
-#+begin_src emacs-lisp
-(add-to-list 'org-latex-classes
-             '("mcdowellcv"
-               "\\documentclass[]{mcdowellcv}
-                \\usepackage{amsmath}
-                \\usepackage[]{multicol}
-                \\usepackage[hidelinks]{hyperref}
-    [NO-DEFAULT-PACKAGES]
-    [NO-PACKAGES]"
-               ("\\section{%s}" . "\\section*{%s}")
-               ("\\subsection{%s}" . "\\subsection*{%s}")
-               ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
-               ("\\paragraph{%s}" . "\\paragraph*{%s}")
-               ("\\subparagraph{%s}" . "\\subparagraph*{%s}")
-               ("\\cvsection{%s}" . "\\cvsection*{%s}")
-               ("\\cvevent{%s}" . "\\cvevent*{%s}")))
-
-#+end_src
-** Better EViL keybinds
-*** Remapping =g-j/k=
-#+begin_src emacs-lisp
-(map! :n "g j" #'evil-next-visual-line)
-(map! :n "g k" #'evil-previous-visual-line)
-#+end_src
-
 * Company-mode for great autocompletes
 I don't really want company-mode to run on timeouts.
 I want VIM-like autocompletion, where =C-x o= and friends gives me my autocompletion.
@@ -939,6 +1017,9 @@ We need to bring in the correct SSH agent values, so that Emacs is aware of wher
 #+end_src
 
 * Md-roam
+:PROPERTIES:
+:CUSTOM_ID: md-roam-config
+:END:
 ** Packages
 #+begin_src emacs-lisp :tangle "packages.el"
 (package! md-roam
@@ -957,15 +1038,6 @@ We need to bring in the correct SSH agent values, so that Emacs is aware of wher
   (setq md-roam-use-org-extract-ref nil)
   (org-roam-db-autosync-mode 1))
 #+end_src
-** COMMENT Capture template for documentation
-#+begin_src emacs-lisp
-(add-to-list 'org-roam-capture-templates
-    '("m" "Markdown" plain "" :target
-        (file+head "training-resources/content/${title}.md"
-"---\ntitle: ${title}\nid: %<%Y-%m-%dT%H%M%S>\ncategory: \n---\n")
-    :unnarrowed t))
-#+end_src
-
 * Funny Stuff
 ** Spray
 #+begin_src emacs-lisp